Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NrlP54846 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NrlP54846 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NrlP54846 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
NrlP54846 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
NrlP54846 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NrlP54846 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Gm11989-201ENSMUST00000117240 672 ntBASIC13.08□□□□□ -0.32
NrlP54846 Gm15515-201ENSMUST00000117827 822 ntBASIC13.08□□□□□ -0.32
NrlP54846 Gm11362-201ENSMUST00000118838 850 ntBASIC13.08□□□□□ -0.32
NrlP54846 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.08□□□□□ -0.32
NrlP54846 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.08□□□□□ -0.32
NrlP54846 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.08□□□□□ -0.32
NrlP54846 Gm18038-201ENSMUST00000197900 485 ntBASIC13.08□□□□□ -0.32
NrlP54846 Gm5051-201ENSMUST00000204085 485 ntBASIC13.08□□□□□ -0.32
NrlP54846 Gm19994-201ENSMUST00000217086 586 ntBASIC13.08□□□□□ -0.32
NrlP54846 Gm5369-201ENSMUST00000217499 588 ntBASIC13.08□□□□□ -0.32
NrlP54846 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.08□□□□□ -0.32
NrlP54846 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.08□□□□□ -0.32
NrlP54846 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.08□□□□□ -0.32
NrlP54846 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NrlP54846 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.08□□□□□ -0.32
NrlP54846 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
NrlP54846 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.08□□□□□ -0.32
NrlP54846 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.08□□□□□ -0.32
NrlP54846 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NrlP54846 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NrlP54846 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
NrlP54846 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NrlP54846 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Gm13045-201ENSMUST00000119019 712 ntBASIC13.07□□□□□ -0.32
NrlP54846 Gm15131-201ENSMUST00000119124 595 ntBASIC13.07□□□□□ -0.32
NrlP54846 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.07□□□□□ -0.32
NrlP54846 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.07□□□□□ -0.32
NrlP54846 Gm15432-201ENSMUST00000121106 195 ntBASIC13.07□□□□□ -0.32
NrlP54846 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.07□□□□□ -0.32
NrlP54846 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Gm19353-201ENSMUST00000184561 445 ntBASIC13.07□□□□□ -0.32
NrlP54846 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.07□□□□□ -0.32
NrlP54846 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NrlP54846 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NrlP54846 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
NrlP54846 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
NrlP54846 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms