Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Gm22323-201ENSMUST00000103832 109 ntBASIC12.14□□□□□ -0.47
Pdx1P52946 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.14□□□□□ -0.47
Pdx1P52946 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Gm37259-201ENSMUST00000193903 849 ntBASIC12.14□□□□□ -0.47
Pdx1P52946 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdx1P52946 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdx1P52946 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.14□□□□□ -0.47
Pdx1P52946 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.14□□□□□ -0.47
Pdx1P52946 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.14□□□□□ -0.47
Pdx1P52946 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pdx1P52946 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pdx1P52946 Matn2-203ENSMUST00000226766 3252 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pdx1P52946 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pdx1P52946 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pdx1P52946 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pdx1P52946 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.13□□□□□ -0.47
Pdx1P52946 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.13□□□□□ -0.47
Pdx1P52946 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.13□□□□□ -0.47
Pdx1P52946 Gm13350-201ENSMUST00000120519 479 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 Gm3096-201ENSMUST00000185770 364 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 Gm4034-201ENSMUST00000187674 480 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.13□□□□□ -0.47
Pdx1P52946 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Gm9996-201ENSMUST00000070359 913 ntBASIC12.13□□□□□ -0.47
Pdx1P52946 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pdx1P52946 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pdx1P52946 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pdx1P52946 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pdx1P52946 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Pdx1P52946 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pdx1P52946 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Gm11930-201ENSMUST00000117788 190 ntBASIC12.12□□□□□ -0.47
Pdx1P52946 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.12□□□□□ -0.47
Pdx1P52946 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.12□□□□□ -0.47
Pdx1P52946 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.12□□□□□ -0.47
Pdx1P52946 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.12□□□□□ -0.47
Pdx1P52946 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.12□□□□□ -0.47
Pdx1P52946 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.12□□□□□ -0.47
Pdx1P52946 Gm10312-201ENSMUST00000078515 489 ntBASIC12.12□□□□□ -0.47
Pdx1P52946 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.12□□□□□ -0.47
Pdx1P52946 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pdx1P52946 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms