Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.17□□□□□ -0.78
Nkx2-1P50220 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm12384-201ENSMUST00000119228 919 ntBASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm15703-201ENSMUST00000120250 880 ntBASIC10.17□□□□□ -0.78
Nkx2-1P50220 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm15429-201ENSMUST00000151268 798 ntBASIC10.17□□□□□ -0.78
Nkx2-1P50220 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm8099-201ENSMUST00000200510 742 ntBASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 AC238811.3-201ENSMUST00000225422 709 ntBASIC10.17□□□□□ -0.78
Nkx2-1P50220 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.17□□□□□ -0.78
Nkx2-1P50220 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC10.17□□□□□ -0.78
Nkx2-1P50220 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Nkx2-1P50220 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gm18018-201ENSMUST00000198273 408 ntBASIC10.16□□□□□ -0.78
Nkx2-1P50220 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.16□□□□□ -0.78
Nkx2-1P50220 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Rgr-203ENSMUST00000225070 4704 ntBASIC10.16□□□□□ -0.78
Nkx2-1P50220 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Nkx2-1P50220 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms