Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.55□□□□□ -0.24
Brca1P48754 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Brca1P48754 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Brca1P48754 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Brca1P48754 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.54□□□□□ -0.24
Brca1P48754 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Brca1P48754 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Brca1P48754 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Gm17192-201ENSMUST00000169031 511 ntBASIC13.54□□□□□ -0.24
Brca1P48754 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Brca1P48754 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Gm37348-201ENSMUST00000193104 1789 ntBASIC13.54□□□□□ -0.24
Brca1P48754 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.54□□□□□ -0.24
Brca1P48754 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC13.54□□□□□ -0.24
Brca1P48754 Gm4811-201ENSMUST00000220879 1220 ntBASIC13.54□□□□□ -0.24
Brca1P48754 Gm4900-201ENSMUST00000222046 1628 ntBASIC13.54□□□□□ -0.24
Brca1P48754 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.54□□□□□ -0.24
Brca1P48754 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.54□□□□□ -0.24
Brca1P48754 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Brca1P48754 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.53□□□□□ -0.24
Brca1P48754 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Gm15615-201ENSMUST00000118876 198 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Gm8459-201ENSMUST00000162504 760 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.53□□□□□ -0.24
Brca1P48754 Gm9916-201ENSMUST00000192943 1228 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.53□□□□□ -0.24
Brca1P48754 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Brca1P48754 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Gm7940-201ENSMUST00000218195 769 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Olfr584-201ENSMUST00000098210 964 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Gm25053-201ENSMUST00000103982 133 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Gm25922-201ENSMUST00000104281 130 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Gm24679-201ENSMUST00000158762 111 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Gm6114-201ENSMUST00000182472 968 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Gm18776-201ENSMUST00000188833 654 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Gm25053-202ENSMUST00000199731 132 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Gm18561-201ENSMUST00000206027 804 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Gm6855-201ENSMUST00000206307 790 ntBASIC13.53□□□□□ -0.24
Brca1P48754 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.53□□□□□ -0.24
Brca1P48754 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Brca1P48754 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Brca1P48754 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Brca1P48754 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brca1P48754 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.52□□□□□ -0.24
Brca1P48754 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Brca1P48754 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
Brca1P48754 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Brca1P48754 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brca1P48754 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brca1P48754 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Brca1P48754 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brca1P48754 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Brca1P48754 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Brca1P48754 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Brca1P48754 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Brca1P48754 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Brca1P48754 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms