Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.91□□□□□ -0.5
Rph3aP47708 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.91□□□□□ -0.5
Rph3aP47708 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.91□□□□□ -0.5
Rph3aP47708 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.91□□□□□ -0.5
Rph3aP47708 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.91□□□□□ -0.5
Rph3aP47708 Gm6007-201ENSMUST00000208170 823 ntBASIC11.91□□□□□ -0.5
Rph3aP47708 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.91□□□□□ -0.5
Rph3aP47708 Gm7046-201ENSMUST00000221351 977 ntBASIC11.91□□□□□ -0.5
Rph3aP47708 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.91□□□□□ -0.5
Rph3aP47708 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Rph3aP47708 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Rph3aP47708 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Rph3aP47708 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rph3aP47708 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.91□□□□□ -0.5
Rph3aP47708 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Rph3aP47708 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.9□□□□□ -0.5
Rph3aP47708 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rph3aP47708 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
Rph3aP47708 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Rph3aP47708 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Rph3aP47708 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.9□□□□□ -0.5
Rph3aP47708 Gm27023-201ENSMUST00000182372 285 ntBASIC11.9□□□□□ -0.5
Rph3aP47708 Gm9022-201ENSMUST00000182482 992 ntBASIC11.9□□□□□ -0.5
Rph3aP47708 Gm29396-201ENSMUST00000185659 716 ntBASIC11.9□□□□□ -0.5
Rph3aP47708 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.9□□□□□ -0.5
Rph3aP47708 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC11.9□□□□□ -0.5
Rph3aP47708 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rph3aP47708 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rph3aP47708 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rph3aP47708 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rph3aP47708 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rph3aP47708 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Rph3aP47708 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rph3aP47708 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.89□□□□□ -0.51
Rph3aP47708 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rph3aP47708 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.89□□□□□ -0.51
Rph3aP47708 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.89□□□□□ -0.51
Rph3aP47708 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.89□□□□□ -0.51
Rph3aP47708 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rph3aP47708 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rph3aP47708 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.89□□□□□ -0.51
Rph3aP47708 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.89□□□□□ -0.51
Rph3aP47708 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Rph3aP47708 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rph3aP47708 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.89□□□□□ -0.51
Rph3aP47708 Gm27243-201ENSMUST00000183964 521 ntBASIC11.89□□□□□ -0.51
Rph3aP47708 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.89□□□□□ -0.51
Rph3aP47708 Gm18304-201ENSMUST00000189162 546 ntBASIC11.89□□□□□ -0.51
Rph3aP47708 Gm37201-201ENSMUST00000191845 523 ntBASIC11.89□□□□□ -0.51
Rph3aP47708 Gm37489-201ENSMUST00000191883 159 ntBASIC11.89□□□□□ -0.51
Rph3aP47708 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms