Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Sox18P43680 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Gm14644-201ENSMUST00000116671 647 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Gm12501-201ENSMUST00000119163 529 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.95□□□□□ -0.5
Sox18P43680 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.95□□□□□ -0.5
Sox18P43680 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.95□□□□□ -0.5
Sox18P43680 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Gm9873-201ENSMUST00000063891 1097 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Ntrk2-209ENSMUST00000225950 2640 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sox18P43680 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sox18P43680 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sox18P43680 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.95□□□□□ -0.5
Sox18P43680 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Gm28359-201ENSMUST00000187470 1322 ntBASIC11.94□□□□□ -0.5
Sox18P43680 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Gm7851-201ENSMUST00000117574 323 ntBASIC11.94□□□□□ -0.5
Sox18P43680 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox18P43680 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox18P43680 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox18P43680 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Sox18P43680 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC11.94□□□□□ -0.5
Sox18P43680 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.94□□□□□ -0.5
Sox18P43680 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC11.94□□□□□ -0.5
Sox18P43680 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.94□□□□□ -0.5
Sox18P43680 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Sox18P43680 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Sox18P43680 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Sox18P43680 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sox18P43680 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms