Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.66□□□□□ -0.54
Cdx2P43241 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm2517-201ENSMUST00000215651 348 ntBASIC11.66□□□□□ -0.54
Cdx2P43241 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdx2P43241 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdx2P43241 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.66□□□□□ -0.54
Cdx2P43241 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.66□□□□□ -0.54
Cdx2P43241 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Cdx2P43241 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.66□□□□□ -0.54
Cdx2P43241 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Cdx2P43241 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Cdx2P43241 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Cdx2P43241 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Gm15595-201ENSMUST00000120840 961 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Gm7666-201ENSMUST00000146631 819 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.65□□□□□ -0.54
Cdx2P43241 Gm29155-201ENSMUST00000185910 269 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdx2P43241 Gm45575-201ENSMUST00000210283 548 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Gm5705-201ENSMUST00000066241 711 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Gm26035-201ENSMUST00000083065 308 ntBASIC11.65□□□□□ -0.54
Cdx2P43241 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Cdx2P43241 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.65□□□□□ -0.54
Cdx2P43241 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Cdx2P43241 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.65□□□□□ -0.55
Cdx2P43241 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Cdx2P43241 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdx2P43241 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdx2P43241 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdx2P43241 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Cdx2P43241 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.64□□□□□ -0.55
Cdx2P43241 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.64□□□□□ -0.55
Cdx2P43241 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Cdx2P43241 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.64□□□□□ -0.55
Cdx2P43241 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm12164-201ENSMUST00000121695 551 ntBASIC11.64□□□□□ -0.55
Cdx2P43241 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdx2P43241 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm28324-201ENSMUST00000187913 264 ntBASIC11.64□□□□□ -0.55
Cdx2P43241 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.64□□□□□ -0.55
Cdx2P43241 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdx2P43241 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Cdx2P43241 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Cdx2P43241 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.64□□□□□ -0.55
Cdx2P43241 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Cdx2P43241 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.64□□□□□ -0.55
Cdx2P43241 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.64□□□□□ -0.55
Cdx2P43241 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Cdx2P43241 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms