Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Gm9996-201ENSMUST00000070359 913 ntBASIC9.87□□□□□ -0.83
Cd27P41272 Gm26232-201ENSMUST00000083360 166 ntBASIC9.87□□□□□ -0.83
Cd27P41272 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.87□□□□□ -0.83
Cd27P41272 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Cd27P41272 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.87□□□□□ -0.83
Cd27P41272 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Cd27P41272 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cd27P41272 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Cd27P41272 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.86□□□□□ -0.83
Cd27P41272 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cd27P41272 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cd27P41272 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cd27P41272 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.86□□□□□ -0.83
Cd27P41272 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.86□□□□□ -0.83
Cd27P41272 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC9.86□□□□□ -0.83
Cd27P41272 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.86□□□□□ -0.83
Cd27P41272 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.86□□□□□ -0.83
Cd27P41272 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Matn2-203ENSMUST00000226766 3252 ntBASIC9.86□□□□□ -0.83
Cd27P41272 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cd27P41272 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cd27P41272 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.85□□□□□ -0.83
Cd27P41272 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC9.85□□□□□ -0.83
Cd27P41272 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.85□□□□□ -0.83
Cd27P41272 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cd27P41272 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC9.85□□□□□ -0.83
Cd27P41272 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cd27P41272 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 AC156031.2-201ENSMUST00000213107 3310 ntBASIC9.85□□□□□ -0.83
Cd27P41272 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Gm14644-201ENSMUST00000116671 647 ntBASIC9.85□□□□□ -0.83
Cd27P41272 Gm12015-201ENSMUST00000117065 843 ntBASIC9.85□□□□□ -0.83
Cd27P41272 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Gm3096-201ENSMUST00000185770 364 ntBASIC9.85□□□□□ -0.83
Cd27P41272 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Gm4034-201ENSMUST00000187674 480 ntBASIC9.85□□□□□ -0.83
Cd27P41272 AA914427-201ENSMUST00000193194 1166 ntBASIC9.85□□□□□ -0.83
Cd27P41272 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.85□□□□□ -0.83
Cd27P41272 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Gm7619-201ENSMUST00000210649 1282 ntBASIC9.85□□□□□ -0.83
Cd27P41272 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Gm18615-201ENSMUST00000222919 1031 ntBASIC9.85□□□□□ -0.83
Cd27P41272 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.85□□□□□ -0.83
Cd27P41272 Gm18263-201ENSMUST00000220846 1928 ntBASIC9.85□□□□□ -0.83
Cd27P41272 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cd27P41272 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms