Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sox6P40645 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.56□□□□□ -0.56
Sox6P40645 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sox6P40645 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sox6P40645 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.55□□□□□ -0.56
Sox6P40645 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox6P40645 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.55□□□□□ -0.56
Sox6P40645 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox6P40645 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.55□□□□□ -0.56
Sox6P40645 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.55□□□□□ -0.56
Sox6P40645 Mir1982-201ENSMUST00000157368 74 ntBASIC11.55□□□□□ -0.56
Sox6P40645 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox6P40645 Gm27682-201ENSMUST00000183930 110 ntBASIC11.55□□□□□ -0.56
Sox6P40645 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.55□□□□□ -0.56
Sox6P40645 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.55□□□□□ -0.56
Sox6P40645 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Gm25857-201ENSMUST00000082788 129 ntBASIC11.55□□□□□ -0.56
Sox6P40645 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sox6P40645 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.55□□□□□ -0.56
Sox6P40645 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sox6P40645 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox6P40645 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox6P40645 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox6P40645 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox6P40645 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.54□□□□□ -0.56
Sox6P40645 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox6P40645 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.54□□□□□ -0.56
Sox6P40645 Gm14660-201ENSMUST00000119809 575 ntBASIC11.54□□□□□ -0.56
Sox6P40645 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Gm9630-201ENSMUST00000178304 885 ntBASIC11.54□□□□□ -0.56
Sox6P40645 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.54□□□□□ -0.56
Sox6P40645 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.54□□□□□ -0.56
Sox6P40645 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.54□□□□□ -0.56
Sox6P40645 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox6P40645 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox6P40645 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox6P40645 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms