Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.61□□□□□ -0.39
Cxcl12P40224 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cxcl12P40224 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.6□□□□□ -0.39
Cxcl12P40224 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm7541-201ENSMUST00000118361 535 ntBASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl12P40224 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm37458-201ENSMUST00000194055 410 ntBASIC12.6□□□□□ -0.39
Cxcl12P40224 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm44506-201ENSMUST00000206278 965 ntBASIC12.6□□□□□ -0.39
Cxcl12P40224 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl12P40224 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm5805-201ENSMUST00000072779 456 ntBASIC12.6□□□□□ -0.39
Cxcl12P40224 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.6□□□□□ -0.39
Cxcl12P40224 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cxcl12P40224 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Cxcl12P40224 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl12P40224 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm15036-201ENSMUST00000118880 400 ntBASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm9135-201ENSMUST00000182963 990 ntBASIC12.59□□□□□ -0.39
Cxcl12P40224 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm18204-201ENSMUST00000209835 793 ntBASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm45856-201ENSMUST00000212752 416 ntBASIC12.59□□□□□ -0.39
Cxcl12P40224 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.59□□□□□ -0.39
Cxcl12P40224 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Cxcl12P40224 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cxcl12P40224 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.59□□□□□ -0.39
Cxcl12P40224 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cxcl12P40224 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Cxcl12P40224 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.58□□□□□ -0.39
Cxcl12P40224 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Cxcl12P40224 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms