Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 AC154354.1-203ENSMUST00000225565 1364 ntBASIC17.98■□□□□ 0.47
Chd1P40201 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Chd1P40201 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
Chd1P40201 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC17.98■□□□□ 0.47
Chd1P40201 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC17.98■□□□□ 0.47
Chd1P40201 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Gm24992-201ENSMUST00000157412 130 ntBASIC17.98■□□□□ 0.47
Chd1P40201 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Chd1P40201 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Chd1P40201 Gm42660-201ENSMUST00000197733 947 ntBASIC17.98■□□□□ 0.47
Chd1P40201 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC17.98■□□□□ 0.47
Chd1P40201 Gm4903-201ENSMUST00000210462 405 ntBASIC17.98■□□□□ 0.47
Chd1P40201 AC098716.1-201ENSMUST00000213527 703 ntBASIC17.98■□□□□ 0.47
Chd1P40201 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Chd1P40201 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Chd1P40201 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Chd1P40201 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Chd1P40201 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.97■□□□□ 0.47
Chd1P40201 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Chd1P40201 Gm14052-201ENSMUST00000121434 1031 ntBASIC17.97■□□□□ 0.47
Chd1P40201 Mir6359-201ENSMUST00000183668 81 ntBASIC17.97■□□□□ 0.47
Chd1P40201 Gm30946-201ENSMUST00000198288 724 ntBASIC17.97■□□□□ 0.47
Chd1P40201 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC17.97■□□□□ 0.47
Chd1P40201 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 AC137871.1-201ENSMUST00000228278 475 ntBASIC17.97■□□□□ 0.47
Chd1P40201 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chd1P40201 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC17.97■□□□□ 0.47
Chd1P40201 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Chd1P40201 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Chd1P40201 Gm37014-201ENSMUST00000194723 2253 ntBASIC17.97■□□□□ 0.47
Chd1P40201 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Prss23os-202ENSMUST00000179361 1362 ntBASIC17.96■□□□□ 0.47
Chd1P40201 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.96■□□□□ 0.47
Chd1P40201 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.96■□□□□ 0.47
Chd1P40201 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC17.96■□□□□ 0.47
Chd1P40201 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC17.96■□□□□ 0.47
Chd1P40201 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC17.96■□□□□ 0.47
Chd1P40201 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Chd1P40201 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC17.96■□□□□ 0.47
Chd1P40201 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC17.96■□□□□ 0.47
Chd1P40201 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Chd1P40201 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC17.96■□□□□ 0.47
Chd1P40201 AC166491.1-201ENSMUST00000227053 2308 ntBASIC17.96■□□□□ 0.47
Chd1P40201 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chd1P40201 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Chd1P40201 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Gm5308-201ENSMUST00000196752 1354 ntBASIC17.96■□□□□ 0.47
Chd1P40201 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Chd1P40201 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Chd1P40201 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Gm8111-201ENSMUST00000117659 987 ntBASIC17.95■□□□□ 0.46
Chd1P40201 Gm13422-201ENSMUST00000118834 504 ntBASIC17.95■□□□□ 0.46
Chd1P40201 Gm26174-201ENSMUST00000158415 219 ntBASIC17.95■□□□□ 0.46
Chd1P40201 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Chd1P40201 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC17.95■□□□□ 0.46
Chd1P40201 Gm6518-201ENSMUST00000208450 342 ntBASIC17.95■□□□□ 0.46
Chd1P40201 CT010480.2-201ENSMUST00000225424 737 ntBASIC17.95■□□□□ 0.46
Chd1P40201 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Chd1P40201 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Chd1P40201 Gm6024-201ENSMUST00000117850 1558 ntBASIC17.95■□□□□ 0.46
Chd1P40201 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms