Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm27390-201ENSMUST00000184516 176 ntBASIC12.37□□□□□ -0.43
Fen1P39749 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.37□□□□□ -0.43
Fen1P39749 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.37□□□□□ -0.43
Fen1P39749 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Fen1P39749 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.37□□□□□ -0.43
Fen1P39749 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.37□□□□□ -0.43
Fen1P39749 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fen1P39749 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fen1P39749 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Fen1P39749 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Fen1P39749 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.37□□□□□ -0.43
Fen1P39749 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fen1P39749 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.37□□□□□ -0.43
Fen1P39749 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Fen1P39749 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fen1P39749 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fen1P39749 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fen1P39749 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Fen1P39749 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Fen1P39749 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.36□□□□□ -0.43
Fen1P39749 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.36□□□□□ -0.43
Fen1P39749 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.36□□□□□ -0.43
Fen1P39749 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.36□□□□□ -0.43
Fen1P39749 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.36□□□□□ -0.43
Fen1P39749 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Gm38671-201ENSMUST00000200573 130 ntBASIC12.36□□□□□ -0.43
Fen1P39749 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Fen1P39749 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Fen1P39749 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Fen1P39749 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Fen1P39749 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Fen1P39749 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Fen1P39749 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Fen1P39749 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.35□□□□□ -0.43
Fen1P39749 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Fen1P39749 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.35□□□□□ -0.43
Fen1P39749 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Gm14921-201ENSMUST00000118643 908 ntBASIC12.35□□□□□ -0.43
Fen1P39749 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.35□□□□□ -0.43
Fen1P39749 Gm9002-201ENSMUST00000178437 499 ntBASIC12.35□□□□□ -0.43
Fen1P39749 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.35□□□□□ -0.43
Fen1P39749 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.35□□□□□ -0.43
Fen1P39749 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Fen1P39749 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.35□□□□□ -0.43
Fen1P39749 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.35□□□□□ -0.43
Fen1P39749 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.35□□□□□ -0.43
Fen1P39749 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Fen1P39749 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.35□□□□□ -0.43
Fen1P39749 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Fen1P39749 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.35□□□□□ -0.43
Fen1P39749 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Fen1P39749 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Fen1P39749 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Fen1P39749 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms