Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Mir1901-201ENSMUST00000122616 78 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm22138-201ENSMUST00000158748 128 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm3793-201ENSMUST00000204973 672 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Sftpa1P35242 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.34□□□□□ -0.59
Sftpa1P35242 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Sftpa1P35242 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Sftpa1P35242 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Sftpa1P35242 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sftpa1P35242 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Gm25880-201ENSMUST00000104331 132 ntBASIC11.33□□□□□ -0.6
Sftpa1P35242 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.33□□□□□ -0.6
Sftpa1P35242 Gm15595-201ENSMUST00000120840 961 ntBASIC11.33□□□□□ -0.6
Sftpa1P35242 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.33□□□□□ -0.6
Sftpa1P35242 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.33□□□□□ -0.6
Sftpa1P35242 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.33□□□□□ -0.6
Sftpa1P35242 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sftpa1P35242 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms