Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Mmp13P33435 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp13P33435 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Gm22018-201ENSMUST00000104357 131 ntBASIC12.58□□□□□ -0.4
Mmp13P33435 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.58□□□□□ -0.4
Mmp13P33435 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.58□□□□□ -0.4
Mmp13P33435 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.58□□□□□ -0.4
Mmp13P33435 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Mmp13P33435 Gm25261-201ENSMUST00000157416 134 ntBASIC12.58□□□□□ -0.4
Mmp13P33435 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.58□□□□□ -0.4
Mmp13P33435 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Gm9823-201ENSMUST00000051212 327 ntBASIC12.58□□□□□ -0.4
Mmp13P33435 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Mmp13P33435 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Mmp13P33435 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.58□□□□□ -0.4
Mmp13P33435 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.58□□□□□ -0.4
Mmp13P33435 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Mmp13P33435 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Mmp13P33435 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Mmp13P33435 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Mmp13P33435 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mmp13P33435 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Mmp13P33435 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mmp13P33435 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Mmp13P33435 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Gm6023-201ENSMUST00000118217 606 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp13P33435 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.57□□□□□ -0.4
Mmp13P33435 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.57□□□□□ -0.4
Mmp13P33435 Gm6222-202ENSMUST00000182143 629 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Gm42627-201ENSMUST00000197347 224 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Gm18054-201ENSMUST00000207539 555 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Gm6007-201ENSMUST00000208170 823 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp13P33435 Gm32025-201ENSMUST00000217960 307 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Gm7399-201ENSMUST00000032395 858 ntBASIC12.57□□□□□ -0.4
Mmp13P33435 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.57□□□□□ -0.4
Mmp13P33435 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Mmp13P33435 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Mmp13P33435 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.56□□□□□ -0.4
Mmp13P33435 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Mmp13P33435 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Gm11591-201ENSMUST00000120063 702 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Mmp13P33435 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.56□□□□□ -0.4
Mmp13P33435 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Mmp13P33435 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms