Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rom1P32958 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rom1P32958 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
Rom1P32958 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rom1P32958 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.7□□□□□ -0.86
Rom1P32958 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Rom1P32958 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.7□□□□□ -0.86
Rom1P32958 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rom1P32958 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rom1P32958 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rom1P32958 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC9.69□□□□□ -0.86
Rom1P32958 Gm14701-201ENSMUST00000117156 348 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 Gm15429-201ENSMUST00000151268 798 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Gm17208-201ENSMUST00000168388 535 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.69□□□□□ -0.86
Rom1P32958 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Gm37042-201ENSMUST00000193816 581 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC9.69□□□□□ -0.86
Rom1P32958 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC9.69□□□□□ -0.86
Rom1P32958 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Rom1P32958 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Rom1P32958 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC9.69□□□□□ -0.86
Rom1P32958 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.69□□□□□ -0.86
Rom1P32958 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rom1P32958 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Rom1P32958 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.68□□□□□ -0.86
Rom1P32958 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Rom1P32958 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC9.68□□□□□ -0.86
Rom1P32958 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC9.68□□□□□ -0.86
Rom1P32958 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.68□□□□□ -0.86
Rom1P32958 Gm22189-201ENSMUST00000103822 86 ntBASIC9.68□□□□□ -0.86
Rom1P32958 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.68□□□□□ -0.86
Rom1P32958 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC9.68□□□□□ -0.86
Rom1P32958 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC9.68□□□□□ -0.86
Rom1P32958 Gm26185-201ENSMUST00000157692 266 ntBASIC9.68□□□□□ -0.86
Rom1P32958 Gm37171-201ENSMUST00000192636 1185 ntBASIC9.68□□□□□ -0.86
Rom1P32958 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC9.68□□□□□ -0.86
Rom1P32958 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC9.68□□□□□ -0.86
Rom1P32958 AW822252-206ENSMUST00000208904 237 ntBASIC9.68□□□□□ -0.86
Rom1P32958 Gm7730-201ENSMUST00000212486 454 ntBASIC9.68□□□□□ -0.86
Rom1P32958 AC125117.1-201ENSMUST00000228121 468 ntBASIC9.68□□□□□ -0.86
Rom1P32958 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rom1P32958 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms