Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 AC150560.1-201ENSMUST00000227731 1187 ntBASIC10.59□□□□□ -0.71
Slc6a1P31648 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gm5356-201ENSMUST00000093326 615 ntBASIC10.59□□□□□ -0.71
Slc6a1P31648 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Slc6a1P31648 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Slc6a1P31648 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.58□□□□□ -0.72
Slc6a1P31648 Gm11978-201ENSMUST00000122315 466 ntBASIC10.58□□□□□ -0.72
Slc6a1P31648 Mir1894-201ENSMUST00000122802 81 ntBASIC10.58□□□□□ -0.72
Slc6a1P31648 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC10.58□□□□□ -0.72
Slc6a1P31648 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.58□□□□□ -0.72
Slc6a1P31648 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.58□□□□□ -0.72
Slc6a1P31648 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Slc6a1P31648 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Slc6a1P31648 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.57□□□□□ -0.72
Slc6a1P31648 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.57□□□□□ -0.72
Slc6a1P31648 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.57□□□□□ -0.72
Slc6a1P31648 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.57□□□□□ -0.72
Slc6a1P31648 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.57□□□□□ -0.72
Slc6a1P31648 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.57□□□□□ -0.72
Slc6a1P31648 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.57□□□□□ -0.72
Slc6a1P31648 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Slc6a1P31648 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.57□□□□□ -0.72
Slc6a1P31648 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms