Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.16□□□□□ -0.62
VtnP29788 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.16□□□□□ -0.62
VtnP29788 Gm25890-201ENSMUST00000177643 165 ntBASIC11.16□□□□□ -0.62
VtnP29788 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.16□□□□□ -0.62
VtnP29788 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.16□□□□□ -0.62
VtnP29788 Gm22614-201ENSMUST00000178300 165 ntBASIC11.16□□□□□ -0.62
VtnP29788 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.16□□□□□ -0.62
VtnP29788 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.16□□□□□ -0.62
VtnP29788 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.16□□□□□ -0.62
VtnP29788 Gm45186-201ENSMUST00000206874 478 ntBASIC11.16□□□□□ -0.62
VtnP29788 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.16□□□□□ -0.62
VtnP29788 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
VtnP29788 Gm22042-201ENSMUST00000082989 165 ntBASIC11.16□□□□□ -0.62
VtnP29788 Gm26232-201ENSMUST00000083360 166 ntBASIC11.16□□□□□ -0.62
VtnP29788 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.16□□□□□ -0.62
VtnP29788 Gm26110-201ENSMUST00000083971 165 ntBASIC11.16□□□□□ -0.62
VtnP29788 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.16□□□□□ -0.62
VtnP29788 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
VtnP29788 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
VtnP29788 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
VtnP29788 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
VtnP29788 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.15□□□□□ -0.62
VtnP29788 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.15□□□□□ -0.62
VtnP29788 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.15□□□□□ -0.62
VtnP29788 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.15□□□□□ -0.62
VtnP29788 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.15□□□□□ -0.62
VtnP29788 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.15□□□□□ -0.62
VtnP29788 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.15□□□□□ -0.62
VtnP29788 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Gm16505-201ENSMUST00000179981 232 ntBASIC11.15□□□□□ -0.62
VtnP29788 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Gm28882-201ENSMUST00000185504 314 ntBASIC11.15□□□□□ -0.62
VtnP29788 Gm42937-201ENSMUST00000197360 752 ntBASIC11.15□□□□□ -0.62
VtnP29788 Gm44958-201ENSMUST00000203734 736 ntBASIC11.15□□□□□ -0.62
VtnP29788 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.15□□□□□ -0.62
VtnP29788 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.15□□□□□ -0.62
VtnP29788 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.15□□□□□ -0.62
VtnP29788 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
VtnP29788 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
VtnP29788 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.15□□□□□ -0.62
VtnP29788 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
VtnP29788 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
VtnP29788 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
VtnP29788 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
VtnP29788 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
VtnP29788 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
VtnP29788 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.14□□□□□ -0.63
VtnP29788 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
VtnP29788 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
VtnP29788 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.14□□□□□ -0.63
VtnP29788 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.14□□□□□ -0.63
VtnP29788 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Gm23119-201ENSMUST00000158610 140 ntBASIC11.14□□□□□ -0.63
VtnP29788 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
VtnP29788 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
VtnP29788 Gm44967-201ENSMUST00000207047 631 ntBASIC11.14□□□□□ -0.63
VtnP29788 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.14□□□□□ -0.63
VtnP29788 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms