Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.31□□□□□ -0.6
Nedd8P29595 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nedd8P29595 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nedd8P29595 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nedd8P29595 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.31□□□□□ -0.6
Nedd8P29595 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.31□□□□□ -0.6
Nedd8P29595 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nedd8P29595 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Nedd8P29595 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Nedd8P29595 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.3□□□□□ -0.6
Nedd8P29595 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.3□□□□□ -0.6
Nedd8P29595 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.3□□□□□ -0.6
Nedd8P29595 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Gm16202-201ENSMUST00000117532 544 ntBASIC11.3□□□□□ -0.6
Nedd8P29595 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.3□□□□□ -0.6
Nedd8P29595 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Gm10253-201ENSMUST00000194270 940 ntBASIC11.3□□□□□ -0.6
Nedd8P29595 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.3□□□□□ -0.6
Nedd8P29595 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.3□□□□□ -0.6
Nedd8P29595 Gm16372-201ENSMUST00000073088 450 ntBASIC11.3□□□□□ -0.6
Nedd8P29595 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.3□□□□□ -0.6
Nedd8P29595 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.3□□□□□ -0.6
Nedd8P29595 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nedd8P29595 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.3□□□□□ -0.6
Nedd8P29595 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.29□□□□□ -0.6
Nedd8P29595 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nedd8P29595 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.29□□□□□ -0.6
Nedd8P29595 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Nedd8P29595 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Nedd8P29595 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nedd8P29595 Gm11524-201ENSMUST00000119349 807 ntBASIC11.29□□□□□ -0.6
Nedd8P29595 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Nedd8P29595 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Gm44344-201ENSMUST00000200287 129 ntBASIC11.29□□□□□ -0.6
Nedd8P29595 Gm19078-201ENSMUST00000206311 727 ntBASIC11.29□□□□□ -0.6
Nedd8P29595 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.29□□□□□ -0.6
Nedd8P29595 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Nedd8P29595 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Nedd8P29595 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Nedd8P29595 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms