Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm28292-201ENSMUST00000186593 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm28101-201ENSMUST00000187608 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm29076-201ENSMUST00000187689 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm28302-201ENSMUST00000187931 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm28646-201ENSMUST00000188220 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm28205-201ENSMUST00000189177 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm29032-201ENSMUST00000189797 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm28695-201ENSMUST00000190300 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm37448-201ENSMUST00000192795 697 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Nsd1-205ENSMUST00000224693 852 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.65□□□□□ -0.38
Nfkb1P25799 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nfkb1P25799 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nfkb1P25799 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nfkb1P25799 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.65□□□□□ -0.39
Nfkb1P25799 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nfkb1P25799 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Nfkb1P25799 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
Nfkb1P25799 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm11989-201ENSMUST00000117240 672 ntBASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm11362-201ENSMUST00000118838 850 ntBASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm12566-201ENSMUST00000121479 359 ntBASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm27627-201ENSMUST00000183644 150 ntBASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm18730-201ENSMUST00000218038 343 ntBASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.64□□□□□ -0.39
Nfkb1P25799 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.64□□□□□ -0.39
Nfkb1P25799 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Nfkb1P25799 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nfkb1P25799 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nfkb1P25799 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.63□□□□□ -0.39
Nfkb1P25799 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.63□□□□□ -0.39
Nfkb1P25799 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nfkb1P25799 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms