Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.55□□□□□ -0.56
Clk1P22518 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.55□□□□□ -0.56
Clk1P22518 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.55□□□□□ -0.56
Clk1P22518 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.55□□□□□ -0.56
Clk1P22518 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Clk1P22518 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Clk1P22518 Dclk3-201ENSMUST00000111879 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.54□□□□□ -0.56
Clk1P22518 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Clk1P22518 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.54□□□□□ -0.56
Clk1P22518 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clk1P22518 Gm16296-201ENSMUST00000159905 325 ntBASIC11.54□□□□□ -0.56
Clk1P22518 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.54□□□□□ -0.56
Clk1P22518 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.54□□□□□ -0.56
Clk1P22518 Gm45930-201ENSMUST00000221330 292 ntBASIC11.54□□□□□ -0.56
Clk1P22518 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Clk1P22518 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.54□□□□□ -0.56
Clk1P22518 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.54□□□□□ -0.56
Clk1P22518 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.54□□□□□ -0.56
Clk1P22518 Duxbl1-201ENSMUST00000049793 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.54□□□□□ -0.56
Clk1P22518 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Clk1P22518 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Clk1P22518 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.54□□□□□ -0.56
Clk1P22518 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.53□□□□□ -0.56
Clk1P22518 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.53□□□□□ -0.56
Clk1P22518 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Clk1P22518 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.53□□□□□ -0.56
Clk1P22518 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.53□□□□□ -0.56
Clk1P22518 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Clk1P22518 Gm27514-201ENSMUST00000183692 110 ntBASIC11.53□□□□□ -0.56
Clk1P22518 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.53□□□□□ -0.56
Clk1P22518 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.53□□□□□ -0.56
Clk1P22518 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.53□□□□□ -0.56
Clk1P22518 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.53□□□□□ -0.56
Clk1P22518 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.53□□□□□ -0.56
Clk1P22518 Gm5781-201ENSMUST00000219792 443 ntBASIC11.53□□□□□ -0.56
Clk1P22518 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Clk1P22518 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Clk1P22518 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Clk1P22518 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms