Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Gm4875-201ENSMUST00000118257 786 ntBASIC12.44□□□□□ -0.42
VimP20152 Gm11779-201ENSMUST00000118541 368 ntBASIC12.44□□□□□ -0.42
VimP20152 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.44□□□□□ -0.42
VimP20152 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.44□□□□□ -0.42
VimP20152 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.44□□□□□ -0.42
VimP20152 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VimP20152 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
VimP20152 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VimP20152 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VimP20152 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VimP20152 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
VimP20152 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
VimP20152 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.43□□□□□ -0.42
VimP20152 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Mir449b-201ENSMUST00000104833 80 ntBASIC12.43□□□□□ -0.42
VimP20152 Gm14350-201ENSMUST00000116642 640 ntBASIC12.43□□□□□ -0.42
VimP20152 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.43□□□□□ -0.42
VimP20152 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
VimP20152 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.43□□□□□ -0.42
VimP20152 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
VimP20152 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
VimP20152 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
VimP20152 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VimP20152 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
VimP20152 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Gm14767-201ENSMUST00000121559 586 ntBASIC12.42□□□□□ -0.42
VimP20152 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.42□□□□□ -0.42
VimP20152 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VimP20152 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
VimP20152 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.42□□□□□ -0.42
VimP20152 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.42□□□□□ -0.42
VimP20152 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms