Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Msx1P13297 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Gm14704-201ENSMUST00000120300 874 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Gm22121-201ENSMUST00000175148 54 ntBASIC11.85□□□□□ -0.51
Msx1P13297 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Gm8099-201ENSMUST00000200510 742 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC11.85□□□□□ -0.51
Msx1P13297 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Mir339-201ENSMUST00000083659 96 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Msx1P13297 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Msx1P13297 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC11.85□□□□□ -0.51
Msx1P13297 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Msx1P13297 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Msx1P13297 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Msx1P13297 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.84□□□□□ -0.51
Msx1P13297 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.84□□□□□ -0.51
Msx1P13297 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Msx1P13297 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Gm11930-201ENSMUST00000117788 190 ntBASIC11.84□□□□□ -0.51
Msx1P13297 Gm11331-201ENSMUST00000119764 288 ntBASIC11.84□□□□□ -0.51
Msx1P13297 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Msx1P13297 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.84□□□□□ -0.51
Msx1P13297 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC11.84□□□□□ -0.51
Msx1P13297 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Msx1P13297 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Msx1P13297 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC11.84□□□□□ -0.51
Msx1P13297 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.84□□□□□ -0.51
Msx1P13297 Gm32025-201ENSMUST00000217960 307 ntBASIC11.84□□□□□ -0.51
Msx1P13297 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.84□□□□□ -0.51
Msx1P13297 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.84□□□□□ -0.51
Msx1P13297 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Msx1P13297 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms