Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc9P09633 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc9P09633 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hoxc9P09633 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm14193-201ENSMUST00000105067 153 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm22711-201ENSMUST00000116890 133 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm13916-201ENSMUST00000117368 628 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm11892-201ENSMUST00000117711 1202 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm15207-201ENSMUST00000119259 442 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Mir7076-201ENSMUST00000183519 74 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm43186-201ENSMUST00000198130 824 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm44980-201ENSMUST00000205826 314 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm43447-201ENSMUST00000198471 1535 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.83■□□□□ 0.12
Hoxc9P09633 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hoxc9P09633 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Hoxc9P09633 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Hoxc9P09633 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Hoxc9P09633 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Hoxc9P09633 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm11628-201ENSMUST00000117568 171 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm16071-201ENSMUST00000119589 793 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm15725-201ENSMUST00000119947 1090 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm12899-201ENSMUST00000120565 551 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm23045-201ENSMUST00000175041 96 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm27910-201ENSMUST00000185004 107 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm17826-201ENSMUST00000189720 798 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm38117-201ENSMUST00000194653 939 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm43520-201ENSMUST00000197996 164 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Hoxc9P09633 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm6903-201ENSMUST00000160509 1366 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hoxc9P09633 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Hoxc9P09633 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Hoxc9P09633 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.82■□□□□ 0.12
Hoxc9P09633 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Gm16166-201ENSMUST00000118291 787 ntBASIC15.81■□□□□ 0.12
Hoxc9P09633 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC15.81■□□□□ 0.12
Hoxc9P09633 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Gm44270-201ENSMUST00000203084 1234 ntBASIC15.81■□□□□ 0.12
Hoxc9P09633 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC15.81■□□□□ 0.12
Hoxc9P09633 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hoxc9P09633 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms