Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdgfrbP05622 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdgfrbP05622 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdgfrbP05622 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PdgfrbP05622 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.45□□□□□ -0.42
PdgfrbP05622 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm15074-201ENSMUST00000117603 936 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm13297-201ENSMUST00000120205 934 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm13263-201ENSMUST00000121271 838 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm12702-201ENSMUST00000123258 612 ntTSL 3 BASIC12.45□□□□□ -0.42
PdgfrbP05622 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.45□□□□□ -0.42
PdgfrbP05622 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm27516-201ENSMUST00000184237 98 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm5950-201ENSMUST00000213337 772 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm8227-201ENSMUST00000223306 571 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm7399-201ENSMUST00000032395 858 ntBASIC12.45□□□□□ -0.42
PdgfrbP05622 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
PdgfrbP05622 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PdgfrbP05622 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.45□□□□□ -0.42
PdgfrbP05622 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.44□□□□□ -0.42
PdgfrbP05622 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PdgfrbP05622 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Gm25214-201ENSMUST00000104573 129 ntBASIC12.44□□□□□ -0.42
PdgfrbP05622 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.44□□□□□ -0.42
PdgfrbP05622 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.44□□□□□ -0.42
PdgfrbP05622 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.44□□□□□ -0.42
PdgfrbP05622 AC125539.1-201ENSMUST00000227423 622 ntBASIC12.44□□□□□ -0.42
PdgfrbP05622 AC154757.2-201ENSMUST00000228885 743 ntBASIC12.44□□□□□ -0.42
PdgfrbP05622 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.44□□□□□ -0.42
PdgfrbP05622 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.44□□□□□ -0.42
PdgfrbP05622 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
PdgfrbP05622 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PdgfrbP05622 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
PdgfrbP05622 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
PdgfrbP05622 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.44□□□□□ -0.42
PdgfrbP05622 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC12.44□□□□□ -0.42
PdgfrbP05622 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PdgfrbP05622 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PdgfrbP05622 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
PdgfrbP05622 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms