Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
CfdP03953 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.25□□□□□ -0.77
CfdP03953 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Gm26308-201ENSMUST00000157768 69 ntBASIC10.25□□□□□ -0.77
CfdP03953 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.25□□□□□ -0.77
CfdP03953 Gm17208-201ENSMUST00000168388 535 ntBASIC10.25□□□□□ -0.77
CfdP03953 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.25□□□□□ -0.77
CfdP03953 Gm27243-201ENSMUST00000183964 521 ntBASIC10.25□□□□□ -0.77
CfdP03953 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.25□□□□□ -0.77
CfdP03953 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CfdP03953 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
CfdP03953 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.25□□□□□ -0.77
CfdP03953 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CfdP03953 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.24□□□□□ -0.77
CfdP03953 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.24□□□□□ -0.77
CfdP03953 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.24□□□□□ -0.77
CfdP03953 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.24□□□□□ -0.77
CfdP03953 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.24□□□□□ -0.77
CfdP03953 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
CfdP03953 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
CfdP03953 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
CfdP03953 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
CfdP03953 Gm16479-201ENSMUST00000121706 932 ntBASIC10.24□□□□□ -0.77
CfdP03953 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Mir7654-201ENSMUST00000185082 70 ntBASIC10.24□□□□□ -0.77
CfdP03953 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Gm37042-201ENSMUST00000193816 581 ntBASIC10.24□□□□□ -0.77
CfdP03953 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
CfdP03953 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.24□□□□□ -0.77
CfdP03953 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CfdP03953 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.24□□□□□ -0.77
CfdP03953 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.23□□□□□ -0.77
CfdP03953 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CfdP03953 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
CfdP03953 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
CfdP03953 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CfdP03953 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.23□□□□□ -0.77
CfdP03953 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
CfdP03953 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
CfdP03953 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.23□□□□□ -0.77
CfdP03953 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
CfdP03953 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
CfdP03953 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
CfdP03953 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms