Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.34□□□□□ -0.75
Hoxa3P02831 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Hoxa3P02831 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm14109-201ENSMUST00000118814 309 ntBASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm14999-201ENSMUST00000121039 624 ntBASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm15276-201ENSMUST00000145953 498 ntBASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm3096-201ENSMUST00000185770 364 ntBASIC10.33□□□□□ -0.76
Hoxa3P02831 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.33□□□□□ -0.76
Hoxa3P02831 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.33□□□□□ -0.76
Hoxa3P02831 CT030182.1-201ENSMUST00000225935 533 ntBASIC10.33□□□□□ -0.76
Hoxa3P02831 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Hoxa3P02831 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Hoxa3P02831 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Hoxa3P02831 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Gm15703-201ENSMUST00000120250 880 ntBASIC10.32□□□□□ -0.76
Hoxa3P02831 Gm14832-201ENSMUST00000121289 322 ntBASIC10.32□□□□□ -0.76
Hoxa3P02831 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.32□□□□□ -0.76
Hoxa3P02831 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.32□□□□□ -0.76
Hoxa3P02831 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Gm27046-201ENSMUST00000182160 463 ntBASIC10.32□□□□□ -0.76
Hoxa3P02831 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.32□□□□□ -0.76
Hoxa3P02831 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Hoxa3P02831 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.32□□□□□ -0.76
Hoxa3P02831 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Hoxa3P02831 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Hoxa3P02831 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms