Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
P01808 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01808 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01808 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.11□□□□□ -0.63
P01808 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
P01808 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
P01808 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.1□□□□□ -0.63
P01808 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Gm14644-201ENSMUST00000116671 647 ntBASIC11.1□□□□□ -0.63
P01808 Gm12015-201ENSMUST00000117065 843 ntBASIC11.1□□□□□ -0.63
P01808 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.1□□□□□ -0.63
P01808 Rprl1-201ENSMUST00000158050 327 ntBASIC11.1□□□□□ -0.63
P01808 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.1□□□□□ -0.63
P01808 Gm20482-202ENSMUST00000174729 825 ntBASIC11.1□□□□□ -0.63
P01808 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.1□□□□□ -0.63
P01808 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.1□□□□□ -0.63
P01808 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.1□□□□□ -0.63
P01808 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
P01808 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
P01808 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
P01808 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
P01808 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Matn2-203ENSMUST00000226766 3252 ntBASIC11.09□□□□□ -0.63
P01808 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.09□□□□□ -0.63
P01808 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
P01808 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.09□□□□□ -0.63
P01808 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Gm23912-201ENSMUST00000104687 87 ntBASIC11.09□□□□□ -0.63
P01808 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.09□□□□□ -0.63
P01808 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01808 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.09□□□□□ -0.63
P01808 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.09□□□□□ -0.63
P01808 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
P01808 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.09□□□□□ -0.63
P01808 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.09□□□□□ -0.63
P01808 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.09□□□□□ -0.63
P01808 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.09□□□□□ -0.63
P01808 Gzmn-202ENSMUST00000225535 989 ntBASIC11.09□□□□□ -0.63
P01808 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
P01808 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
P01808 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.09□□□□□ -0.63
P01808 Cog3-203ENSMUST00000227473 4197 ntBASIC11.09□□□□□ -0.63
P01808 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P01808 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P01808 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.63
P01808 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
P01808 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
P01808 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01808 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P01808 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P01808 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms