Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Igh-VJ558P01758 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igh-VJ558P01758 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igh-VJ558P01758 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igh-VJ558P01758 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igh-VJ558P01758 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Igh-VJ558P01758 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Igh-VJ558P01758 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm18626-201ENSMUST00000221512 1409 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm12742-201ENSMUST00000117326 410 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm12036-201ENSMUST00000120008 530 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Igh-VJ558P01758 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm15370-201ENSMUST00000117158 253 ntBASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm17420-201ENSMUST00000164753 153 ntBASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm37489-201ENSMUST00000191883 159 ntBASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Igh-VJ558P01758 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms