Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Hcn1O88704 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Map1b-203ENSMUST00000223725 2669 ntBASIC11.79□□□□□ -0.52
Hcn1O88704 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Gm14921-201ENSMUST00000118643 908 ntBASIC11.79□□□□□ -0.52
Hcn1O88704 Gm12502-201ENSMUST00000120197 444 ntBASIC11.79□□□□□ -0.52
Hcn1O88704 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.79□□□□□ -0.52
Hcn1O88704 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.79□□□□□ -0.52
Hcn1O88704 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.79□□□□□ -0.52
Hcn1O88704 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.79□□□□□ -0.52
Hcn1O88704 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.79□□□□□ -0.52
Hcn1O88704 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.79□□□□□ -0.52
Hcn1O88704 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.79□□□□□ -0.52
Hcn1O88704 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hcn1O88704 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.79□□□□□ -0.52
Hcn1O88704 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.79□□□□□ -0.52
Hcn1O88704 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hcn1O88704 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hcn1O88704 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hcn1O88704 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hcn1O88704 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Hcn1O88704 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.78□□□□□ -0.52
Hcn1O88704 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.78□□□□□ -0.52
Hcn1O88704 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.78□□□□□ -0.52
Hcn1O88704 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.78□□□□□ -0.52
Hcn1O88704 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.78□□□□□ -0.52
Hcn1O88704 Gm38158-201ENSMUST00000194617 339 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.78□□□□□ -0.52
Hcn1O88704 Olfr284-202ENSMUST00000206647 966 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.78□□□□□ -0.52
Hcn1O88704 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hcn1O88704 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Hcn1O88704 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.78□□□□□ -0.52
Hcn1O88704 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.78□□□□□ -0.52
Hcn1O88704 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hcn1O88704 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hcn1O88704 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hcn1O88704 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms