Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.08□□□□□ -0.48
ClppO88696 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.08□□□□□ -0.48
ClppO88696 Gm15276-201ENSMUST00000145953 498 ntBASIC12.08□□□□□ -0.48
ClppO88696 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.08□□□□□ -0.48
ClppO88696 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Gm2383-201ENSMUST00000181461 807 ntBASIC12.08□□□□□ -0.48
ClppO88696 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.08□□□□□ -0.48
ClppO88696 Gm5363-201ENSMUST00000211927 938 ntBASIC12.08□□□□□ -0.48
ClppO88696 Gm5950-201ENSMUST00000213337 772 ntBASIC12.08□□□□□ -0.48
ClppO88696 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.08□□□□□ -0.48
ClppO88696 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ClppO88696 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.08□□□□□ -0.48
ClppO88696 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.08□□□□□ -0.48
ClppO88696 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.08□□□□□ -0.48
ClppO88696 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ClppO88696 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ClppO88696 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.07□□□□□ -0.48
ClppO88696 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ClppO88696 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.07□□□□□ -0.48
ClppO88696 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ClppO88696 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ClppO88696 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ClppO88696 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
ClppO88696 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.07□□□□□ -0.48
ClppO88696 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.07□□□□□ -0.48
ClppO88696 Gm15547-201ENSMUST00000122152 333 ntBASIC12.07□□□□□ -0.48
ClppO88696 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.07□□□□□ -0.48
ClppO88696 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.07□□□□□ -0.48
ClppO88696 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
ClppO88696 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.07□□□□□ -0.48
ClppO88696 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.07□□□□□ -0.48
ClppO88696 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.07□□□□□ -0.48
ClppO88696 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.07□□□□□ -0.48
ClppO88696 Gm26461-201ENSMUST00000175064 290 ntBASIC12.07□□□□□ -0.48
ClppO88696 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.07□□□□□ -0.48
ClppO88696 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.07□□□□□ -0.48
ClppO88696 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.07□□□□□ -0.48
ClppO88696 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.07□□□□□ -0.48
ClppO88696 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.07□□□□□ -0.48
ClppO88696 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.07□□□□□ -0.48
ClppO88696 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ClppO88696 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.07□□□□□ -0.48
ClppO88696 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
ClppO88696 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.07□□□□□ -0.48
ClppO88696 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClppO88696 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClppO88696 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClppO88696 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ClppO88696 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
ClppO88696 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.06□□□□□ -0.48
ClppO88696 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
ClppO88696 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
ClppO88696 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.06□□□□□ -0.48
ClppO88696 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClppO88696 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ClppO88696 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ClppO88696 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.06□□□□□ -0.48
ClppO88696 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.06□□□□□ -0.48
ClppO88696 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms