Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.42□□□□□ -0.58
BckdkO55028 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.42□□□□□ -0.58
BckdkO55028 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
BckdkO55028 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
BckdkO55028 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.42□□□□□ -0.58
BckdkO55028 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.42□□□□□ -0.58
BckdkO55028 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Gm14921-201ENSMUST00000118643 908 ntBASIC11.42□□□□□ -0.58
BckdkO55028 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.42□□□□□ -0.58
BckdkO55028 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.42□□□□□ -0.58
BckdkO55028 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.42□□□□□ -0.58
BckdkO55028 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.42□□□□□ -0.58
BckdkO55028 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.42□□□□□ -0.58
BckdkO55028 Gm6082-201ENSMUST00000215204 454 ntBASIC11.42□□□□□ -0.58
BckdkO55028 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
BckdkO55028 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
BckdkO55028 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.42□□□□□ -0.58
BckdkO55028 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
BckdkO55028 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
BckdkO55028 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.41□□□□□ -0.58
BckdkO55028 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Gm42706-201ENSMUST00000199733 1910 ntBASIC11.41□□□□□ -0.58
BckdkO55028 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.41□□□□□ -0.58
BckdkO55028 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.41□□□□□ -0.58
BckdkO55028 Gm12291-201ENSMUST00000121627 311 ntBASIC11.41□□□□□ -0.58
BckdkO55028 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.41□□□□□ -0.58
BckdkO55028 Gm29199-201ENSMUST00000187766 775 ntBASIC11.41□□□□□ -0.58
BckdkO55028 Gm31256-201ENSMUST00000194705 506 ntBASIC11.41□□□□□ -0.58
BckdkO55028 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.41□□□□□ -0.58
BckdkO55028 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.41□□□□□ -0.58
BckdkO55028 Gm30285-201ENSMUST00000214614 422 ntBASIC11.41□□□□□ -0.58
BckdkO55028 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.41□□□□□ -0.58
BckdkO55028 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.41□□□□□ -0.58
BckdkO55028 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
BckdkO55028 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
BckdkO55028 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
BckdkO55028 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
BckdkO55028 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.4□□□□□ -0.58
BckdkO55028 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
BckdkO55028 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
BckdkO55028 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
BckdkO55028 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
BckdkO55028 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
BckdkO55028 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
BckdkO55028 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
BckdkO55028 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
BckdkO55028 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 705.7 ms