Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.02□□□□□ -0.32
Itgb3O54890 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Itgb3O54890 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Itgb3O54890 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Itgb3O54890 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.02□□□□□ -0.33
Itgb3O54890 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.02□□□□□ -0.33
Itgb3O54890 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.02□□□□□ -0.33
Itgb3O54890 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Itgb3O54890 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Itgb3O54890 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Itgb3O54890 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Itgb3O54890 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Itgb3O54890 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Itgb3O54890 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.01□□□□□ -0.33
Itgb3O54890 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Itgb3O54890 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Gm14028-201ENSMUST00000117434 479 ntBASIC13.01□□□□□ -0.33
Itgb3O54890 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.01□□□□□ -0.33
Itgb3O54890 Gm24749-201ENSMUST00000157838 343 ntBASIC13.01□□□□□ -0.33
Itgb3O54890 Rprl1-201ENSMUST00000158050 327 ntBASIC13.01□□□□□ -0.33
Itgb3O54890 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Gm37466-201ENSMUST00000195692 652 ntBASIC13.01□□□□□ -0.33
Itgb3O54890 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.01□□□□□ -0.33
Itgb3O54890 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Itgb3O54890 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Itgb3O54890 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Itgb3O54890 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.01□□□□□ -0.33
Itgb3O54890 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Itgb3O54890 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.01□□□□□ -0.33
Itgb3O54890 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.01□□□□□ -0.33
Itgb3O54890 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Itgb3O54890 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Itgb3O54890 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Itgb3O54890 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Itgb3O54890 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13□□□□□ -0.33
Itgb3O54890 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Itgb3O54890 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13□□□□□ -0.33
Itgb3O54890 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Itgb3O54890 Gm38355-201ENSMUST00000192514 1570 ntBASIC13□□□□□ -0.33
Itgb3O54890 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Itgb3O54890 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13□□□□□ -0.33
Itgb3O54890 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13□□□□□ -0.33
Itgb3O54890 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13□□□□□ -0.33
Itgb3O54890 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13□□□□□ -0.33
Itgb3O54890 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13□□□□□ -0.33
Itgb3O54890 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Itgb3O54890 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Itgb3O54890 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Itgb3O54890 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Itgb3O54890 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms