Protein–RNA interactions for Protein: O35228

Ebi3, Interleukin-27 subunit beta, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebi3O35228 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ebi3O35228 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ebi3O35228 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Ebi3O35228 Gm2673-201ENSMUST00000120958 1608 ntBASIC9.42□□□□□ -0.9
Ebi3O35228 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ebi3O35228 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ebi3O35228 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC9.41□□□□□ -0.9
Ebi3O35228 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
Ebi3O35228 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ebi3O35228 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Gm24934-201ENSMUST00000103764 111 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 Gm22018-201ENSMUST00000104357 131 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
Ebi3O35228 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.41□□□□□ -0.9
Ebi3O35228 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Ebi3O35228 Gm42693-201ENSMUST00000196779 631 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 AC166095.1-201ENSMUST00000223731 1241 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 AC122860.2-201ENSMUST00000217967 2671 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ebi3O35228 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Ebi3O35228 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Gm43174-201ENSMUST00000195914 2445 ntBASIC9.41□□□□□ -0.9
Ebi3O35228 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.41□□□□□ -0.9
Ebi3O35228 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Ebi3O35228 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Gm13142-201ENSMUST00000117213 1453 ntBASIC9.4□□□□□ -0.9
Ebi3O35228 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.4□□□□□ -0.9
Ebi3O35228 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Gm4366-201ENSMUST00000201488 1342 ntBASIC9.4□□□□□ -0.9
Ebi3O35228 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.4□□□□□ -0.9
Ebi3O35228 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Gm23912-201ENSMUST00000104687 87 ntBASIC9.4□□□□□ -0.9
Ebi3O35228 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Gm13829-201ENSMUST00000119600 138 ntBASIC9.4□□□□□ -0.9
Ebi3O35228 Gm12329-201ENSMUST00000120829 1007 ntBASIC9.4□□□□□ -0.9
Ebi3O35228 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC9.4□□□□□ -0.9
Ebi3O35228 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.4□□□□□ -0.9
Ebi3O35228 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
Ebi3O35228 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.4□□□□□ -0.9
Ebi3O35228 Gm9004-201ENSMUST00000218739 1222 ntBASIC9.4□□□□□ -0.9
Ebi3O35228 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.4□□□□□ -0.9
Ebi3O35228 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Ebi3O35228 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
Ebi3O35228 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms