Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Raet1aO08602 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Raet1aO08602 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.9□□□□□ -0.66
Raet1aO08602 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.9□□□□□ -0.66
Raet1aO08602 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Raet1aO08602 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Raet1aO08602 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Raet1aO08602 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Gm4986-201ENSMUST00000119731 549 ntBASIC10.9□□□□□ -0.66
Raet1aO08602 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.9□□□□□ -0.66
Raet1aO08602 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.9□□□□□ -0.66
Raet1aO08602 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Gm25043-201ENSMUST00000158604 212 ntBASIC10.9□□□□□ -0.66
Raet1aO08602 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.9□□□□□ -0.66
Raet1aO08602 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC10.9□□□□□ -0.66
Raet1aO08602 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Raet1aO08602 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.9□□□□□ -0.66
Raet1aO08602 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.9□□□□□ -0.66
Raet1aO08602 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Raet1aO08602 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.9□□□□□ -0.66
Raet1aO08602 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1aO08602 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Raet1aO08602 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Raet1aO08602 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1aO08602 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1aO08602 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
Raet1aO08602 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Raet1aO08602 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Raet1aO08602 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Gm13786-201ENSMUST00000122371 333 ntBASIC10.89□□□□□ -0.67
Raet1aO08602 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Raet1aO08602 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC10.89□□□□□ -0.67
Raet1aO08602 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.89□□□□□ -0.67
Raet1aO08602 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Raet1aO08602 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.89□□□□□ -0.67
Raet1aO08602 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Raet1aO08602 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Raet1aO08602 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms