Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim55G3X8Y1 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim55G3X8Y1 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim55G3X8Y1 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim55G3X8Y1 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms