Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdh1F7BJK1 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Gm12490-201ENSMUST00000120255 560 ntBASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Gm15806-201ENSMUST00000120696 955 ntBASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Pcdh1F7BJK1 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm11478-201ENSMUST00000117851 599 ntBASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm11597-201ENSMUST00000121423 964 ntBASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm24196-201ENSMUST00000179161 110 ntBASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm27892-201ENSMUST00000185017 106 ntBASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm18304-201ENSMUST00000189162 546 ntBASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Pcdh1F7BJK1 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms