Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Gm37851-201ENSMUST00000193871 889 ntBASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Gm2448-201ENSMUST00000207080 559 ntBASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Rps3a2-201ENSMUST00000074245 792 ntBASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Rps3a3-201ENSMUST00000074680 795 ntBASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc188F6WEU2 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc188F6WEU2 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.33□□□□□ -0.43
Ccdc188F6WEU2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Ccdc188F6WEU2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Gm12791-201ENSMUST00000120788 655 ntBASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Gm43671-201ENSMUST00000200422 433 ntBASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Gm8574-201ENSMUST00000203207 924 ntBASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc188F6WEU2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm12736-201ENSMUST00000119330 236 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm24809-201ENSMUST00000175318 271 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm6606-201ENSMUST00000193613 947 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm37452-201ENSMUST00000194416 1160 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm34379-201ENSMUST00000195036 290 ntBASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.32□□□□□ -0.44
Ccdc188F6WEU2 Gm10580-201ENSMUST00000097985 396 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms