Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.71□□□□□ -0.05
Ube4aE9Q735 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ube4aE9Q735 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4aE9Q735 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4aE9Q735 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Ube4aE9Q735 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.71□□□□□ -0.06
Ube4aE9Q735 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4aE9Q735 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4aE9Q735 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ube4aE9Q735 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC14.7□□□□□ -0.06
Ube4aE9Q735 Gm44126-201ENSMUST00000204831 514 ntBASIC14.7□□□□□ -0.06
Ube4aE9Q735 Gm8285-201ENSMUST00000208293 759 ntBASIC14.7□□□□□ -0.06
Ube4aE9Q735 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.7□□□□□ -0.06
Ube4aE9Q735 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.7□□□□□ -0.06
Ube4aE9Q735 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm15595-201ENSMUST00000120840 961 ntBASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm13263-201ENSMUST00000121271 838 ntBASIC14.69□□□□□ -0.06
Ube4aE9Q735 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm15881-201ENSMUST00000148792 942 ntBASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.69□□□□□ -0.06
Ube4aE9Q735 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
Ube4aE9Q735 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ube4aE9Q735 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms