Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Gm14165-201ENSMUST00000121456 952 ntBASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Gm16560-201ENSMUST00000159115 404 ntBASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Tff3-201ENSMUST00000024827 493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Col6a3E9PWQ3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Gm11993-201ENSMUST00000121861 820 ntBASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Gm15033-201ENSMUST00000118188 673 ntBASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Gm8255-201ENSMUST00000218693 305 ntBASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 AC102523.1-201ENSMUST00000228706 1144 ntBASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Col6a3E9PWQ3 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm25591-201ENSMUST00000177317 94 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm3379-201ENSMUST00000222259 642 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm23458-201ENSMUST00000083257 169 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Grk6-205ENSMUST00000224653 2976 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm9372-201ENSMUST00000168454 430 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm9578-201ENSMUST00000182354 753 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Col6a3E9PWQ3 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms