Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Gm4768-201ENSMUST00000206199 686 ntBASIC13.48□□□□□ -0.25
Trim30cD3YVI9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim30cD3YVI9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Gm44044-201ENSMUST00000205178 1089 ntBASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Snora73a-201ENSMUST00000082453 205 ntBASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim30cD3YVI9 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm17208-201ENSMUST00000168388 535 ntBASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm37008-201ENSMUST00000195712 319 ntBASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm42693-201ENSMUST00000196779 631 ntBASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm19184-201ENSMUST00000196798 928 ntBASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim30cD3YVI9 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trim30cD3YVI9 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trim30cD3YVI9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms