Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm24644-201ENSMUST00000157114 139 ntBASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm7029-201ENSMUST00000173226 450 ntBASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm45930-201ENSMUST00000221330 292 ntBASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 AC154239.3-201ENSMUST00000226933 674 ntBASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trbv29A0A0G2LB96 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gm12314-201ENSMUST00000118104 538 ntBASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gm14928-201ENSMUST00000120198 477 ntBASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gm26927-201ENSMUST00000182385 965 ntBASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gm27486-201ENSMUST00000184923 80 ntBASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trbv29A0A0G2LB96 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms