Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Trav6n-6A0A075B6B2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm4984-201ENSMUST00000115987 360 ntBASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 AC135669.1-202ENSMUST00000216742 540 ntBASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 CT573086.1-201ENSMUST00000227202 1074 ntBASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav6n-6A0A075B6B2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm16202-201ENSMUST00000117532 544 ntBASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm8213-201ENSMUST00000118191 441 ntBASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm15163-201ENSMUST00000120749 1302 ntBASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.18□□□□□ -0.94
Trav6n-6A0A075B6B2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms