Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Gm38055-201ENSMUST00000195353 2217 ntBASIC8.79□□□□□ -1
Trav8-1A0A075B641 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Gm3436-201ENSMUST00000179930 840 ntBASIC8.79□□□□□ -1
Trav8-1A0A075B641 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Gm18905-201ENSMUST00000205454 928 ntBASIC8.79□□□□□ -1
Trav8-1A0A075B641 Gm44985-201ENSMUST00000206202 1016 ntBASIC8.79□□□□□ -1
Trav8-1A0A075B641 AC140397.2-201ENSMUST00000224213 834 ntBASIC8.79□□□□□ -1
Trav8-1A0A075B641 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC8.79□□□□□ -1
Trav8-1A0A075B641 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Mir449b-201ENSMUST00000104833 80 ntBASIC8.78□□□□□ -1
Trav8-1A0A075B641 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Gm15693-201ENSMUST00000120470 637 ntBASIC8.78□□□□□ -1
Trav8-1A0A075B641 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 AC154276.1-201ENSMUST00000228874 1299 ntBASIC8.78□□□□□ -1
Trav8-1A0A075B641 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Trav8-1A0A075B641 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Gm14132-201ENSMUST00000117188 1719 ntBASIC8.77□□□□□ -1
Trav8-1A0A075B641 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
Trav8-1A0A075B641 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Trav8-1A0A075B641 Nell2-202ENSMUST00000166170 3366 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms