Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.09□□□□□ -0.63
H2afb3S4R1G7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Gm5904-201ENSMUST00000210286 865 ntBASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Gm7561-201ENSMUST00000211203 886 ntBASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
H2afb3S4R1G7 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
H2afb3S4R1G7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.08□□□□□ -0.63
H2afb3S4R1G7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Gm5035-201ENSMUST00000215581 927 ntBASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Gm8227-201ENSMUST00000223306 571 ntBASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
H2afb3S4R1G7 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
H2afb3S4R1G7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms