Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm19353-201ENSMUST00000184561 445 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm38151-201ENSMUST00000195085 289 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm12579-201ENSMUST00000118040 783 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm11450-201ENSMUST00000121144 333 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Gm21811-201ENSMUST00000096485 930 ntBASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Scn8aQ9WTU3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Gm12501-201ENSMUST00000119163 529 ntBASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Gm4310-201ENSMUST00000177847 889 ntBASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Scn8aQ9WTU3 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Gm13035-201ENSMUST00000117496 342 ntBASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Gm28686-201ENSMUST00000187404 609 ntBASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Scn8aQ9WTU3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Scn8aQ9WTU3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms