Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm23270-201ENSMUST00000104055 131 ntBASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Mir877-201ENSMUST00000104738 85 ntBASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm25043-201ENSMUST00000158604 212 ntBASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm37201-201ENSMUST00000191845 523 ntBASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Clcf1Q9QZM3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm15236-201ENSMUST00000117309 379 ntBASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm15808-201ENSMUST00000119046 604 ntBASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Clcf1Q9QZM3 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Clcf1Q9QZM3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms