Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm14381-201ENSMUST00000122105 414 ntBASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm18304-201ENSMUST00000189162 546 ntBASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm31256-201ENSMUST00000194705 506 ntBASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2aQ9DB34 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp2aQ9DB34 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp2aQ9DB34 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Gm11222-201ENSMUST00000119005 738 ntBASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Gm9083-201ENSMUST00000120423 819 ntBASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2aQ9DB34 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2aQ9DB34 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms