Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
U2af1Q9D883 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
U2af1Q9D883 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm27341-201ENSMUST00000183570 106 ntBASIC16.15■□□□□ 0.18
U2af1Q9D883 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm7003-201ENSMUST00000195089 312 ntBASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm45433-201ENSMUST00000209386 247 ntBASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Adra1a-206ENSMUST00000225182 2337 ntBASIC16.15■□□□□ 0.18
U2af1Q9D883 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC16.15■□□□□ 0.18
U2af1Q9D883 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm37513-201ENSMUST00000194830 2268 ntBASIC16.15■□□□□ 0.18
U2af1Q9D883 Gm38378-201ENSMUST00000195153 2268 ntBASIC16.15■□□□□ 0.18
U2af1Q9D883 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
U2af1Q9D883 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
U2af1Q9D883 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
U2af1Q9D883 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.14■□□□□ 0.17
U2af1Q9D883 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
U2af1Q9D883 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
U2af1Q9D883 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Gm11439-201ENSMUST00000118598 409 ntBASIC16.14■□□□□ 0.17
U2af1Q9D883 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
U2af1Q9D883 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC16.14■□□□□ 0.17
U2af1Q9D883 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.14■□□□□ 0.17
U2af1Q9D883 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Gm8385-201ENSMUST00000058999 643 ntBASIC16.14■□□□□ 0.17
U2af1Q9D883 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Gm10305-201ENSMUST00000195331 2475 ntBASIC16.14■□□□□ 0.17
U2af1Q9D883 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
U2af1Q9D883 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC16.14■□□□□ 0.17
U2af1Q9D883 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC16.14■□□□□ 0.17
U2af1Q9D883 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
U2af1Q9D883 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
U2af1Q9D883 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC16.13■□□□□ 0.17
U2af1Q9D883 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
U2af1Q9D883 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
U2af1Q9D883 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms