Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.63□□□□□ -0.39
Vps28Q9D1C8 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm15276-201ENSMUST00000145953 498 ntBASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm18304-201ENSMUST00000189162 546 ntBASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm13097-201ENSMUST00000210722 397 ntBASIC12.63□□□□□ -0.39
Vps28Q9D1C8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.63□□□□□ -0.39
Vps28Q9D1C8 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vps28Q9D1C8 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm24830-201ENSMUST00000102024 166 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm15808-201ENSMUST00000119046 604 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm25890-201ENSMUST00000177643 165 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm22614-201ENSMUST00000178300 165 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm22042-201ENSMUST00000082989 165 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm26232-201ENSMUST00000083360 166 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm24136-201ENSMUST00000083374 165 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm26110-201ENSMUST00000083971 165 ntBASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vps28Q9D1C8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vps28Q9D1C8 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms