Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc3Q9CWU5 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc3Q9CWU5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc3Q9CWU5 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc3Q9CWU5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc3Q9CWU5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Khdc3Q9CWU5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Mir7085-201ENSMUST00000184353 66 ntBASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Gm38002-201ENSMUST00000193255 180 ntBASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Gm43133-201ENSMUST00000197472 463 ntBASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Khdc3Q9CWU5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gm8062-201ENSMUST00000139696 444 ntBASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gm13316-201ENSMUST00000140537 691 ntBASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 AY702102-202ENSMUST00000194651 1173 ntBASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Khdc3Q9CWU5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms